SubtiBank SubtiBank
yybO [2018-10-04 20:35:27]
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yybO [2018-10-04 20:35:27]

similar to permease
locus
BSU40570
pI
9.81
mw
48.09 kDa
protein length
435 aa Sequence Blast
gene length
1305 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    4,170,045 → 4,171,352

    The protein

    Protein family

  • Phthalate permease family (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|41AB19B291C766E55CA1C5BAEF157FD26B5D4297|yybO]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|26577401], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B839 (yybO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1838 NBRP B. subtilis, Japan]
  • BKE40570 (Δ[gene|41AB19B291C766E55CA1C5BAEF157FD26B5D4297|yybO]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40570 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGCATGATCTCCTGATA, downstream forward: _UP4_TAGAACATGAAAAAGAGAGC
  • BKK40570 (Δ[gene|41AB19B291C766E55CA1C5BAEF157FD26B5D4297|yybO]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40570 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGCATGATCTCCTGATA, downstream forward: _UP4_TAGAACATGAAAAAGAGAGC

    • References

  • 26577401